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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015882434.1_cds_XP_016438165.1_33857
CDS Infomation

[gene=LOC107764140] [db_xref=GeneID:107764140] [protein=RING finger and transmembrane domain-containing protein 1-like] [protein_id=XP_016438165.1] [location=complement(join(489..632,3993..4070,4241..4405,4538..4626,4744..4912,5086..5162,5539..6190))] [gbkey=CDS]
Sequence

ATGCGGATGGAAGCGTCCGGTACAAATTCGGACGCACACAGAGGTATTTCTTCATCGACT
AGTAGCAATATTGGTATTAATTCTAGAAGACATGGAGGAGGAGTGCAATTATCTGCTTCG
AATTTATTTCGTGCGCCATTATCAACATTATTGGAATATTCTGGAATTTTAAGGACAAGG
TCAAATCATTCAGAATCCGATAGTTTGATAAACAGTGGGGTCCGCGATCATTTTCAGTCC
CGTGTGGATGATGATAACGCTGGGGCATCATCACCAGCTTCTGCTGCTGGTGGTTCTGGT
GAAGTTTCAATTAGGATTATTGGTGCGGGCGAGCAAGATCATGATAGAGTTGGGACTGTT
GGTGTTGGACCAGTGAGGGAAGTGGATGGGCAAAATGAAGGTTTCGGGAGGCCAATTTCA
AGGTCGGGGTCTGCAGCTTCAGTCGGAGCATTGGAGAGTCAACCGGGTGATAGAGGGGCG
GGAGATGGTGTCAATGGAAGCGCAGATACGGGGGCTGCTGACGGTGCTGGTGTTAATAAT
AGGGAGTCTTCTTACCAAAGATATGATATACAGCAGGCTGCTAGGTGGATTGAGCAAATT
ATTCCGTTCTCTTTGCTTTTGTTGATTGTTTTCATCCGGCAGCATTTGCAAGGTTTCTTT
GTTACAATTTTGATCGCTGCCGTCATGTTCAAGTCAAATGATATTGTAAAGAAGCAGACT
GCACTTAAGGGCGAGAGGAAAATCTCTGTTTTGATCGGTGTATGTCTTCTGTTCAGCGGT
TATGTAGTTGGCTTTTATTGGTGGTACCGAAATGATGATCTTTTGTATCCATTGTTGATG
CTACCACCAAAGGCCATACCTCCTTTTTGGCATGCGATCTTCATAATCATGGTGAATGAT
ACTTTGGTTCGCCAGGCAGCAATGGTCTTCAAATGTTTTCTGCTGATGTATTACAAGAAT
AGCAGGGGCCGGAACTACCGCAAGCAGGGTCAATTGCTAACTTTGGTTGAGTATCTTGTA
CTGCTATATCGTGCTCTGCTTCCAGCGCCAGTTTGGTATCGTTTCTTTTTGAACAAGGAA
TACGGAAGCCTCTTTTCATCATTAATGACCGGGCTGTATCTAACTTTTAAGCTGACTTCT
GTTGTCGAGAAGGTCCAATCTTTCTTCACAGCTCTGAAGGCGCTGTCACGTAAGGAGATT
CACTATGGAGTATATGCGACCCCTGAACAGGTCAATGCAGCGGGGGATCTCTGCGCTATT
TGCCAGGAGAAAATGCATACACCAATCTTACTACGTTGTAAACACTTATTTTGCGAAGAC
TGTGTTTCTGAATGGTCAGTTTTCTGCCTTTTGCTTCAACCATTTGTGCTTTGA

Peptide Sequence

PEP ID

XP_016438165.1
PEP Infomation

PREDICTED: RING finger and transmembrane domain-containing protein 1-like [Nicotiana tabacum]
Sequence

MRMEASGTNSDAHRGISSSTSSNIGINSRRHGGGVQLSASNLFRAPLSTLLEYSGILRTR
SNHSESDSLINSGVRDHFQSRVDDDNAGASSPASAAGGSGEVSIRIIGAGEQDHDRVGTV
GVGPVREVDGQNEGFGRPISRSGSAASVGALESQPGDRGAGDGVNGSADTGAADGAGVNN
RESSYQRYDIQQAARWIEQIIPFSLLLLIVFIRQHLQGFFVTILIAAVMFKSNDIVKKQT
ALKGERKISVLIGVCLLFSGYVVGFYWWYRNDDLLYPLLMLPPKAIPPFWHAIFIIMVND
TLVRQAAMVFKCFLLMYYKNSRGRNYRKQGQLLTLVEYLVLLYRALLPAPVWYRFFLNKE
YGSLFSSLMTGLYLTFKLTSVVEKVQSFFTALKALSRKEIHYGVYATPEQVNAAGDLCAI
CQEKMHTPILLRCKHLFCEDCVSEWSVFCLLLQPFVL

Transcript Sequence

Gene sequence data has not been registered.